Uses of Class
broadwick.stochastic.SimulationEvent

Packages that use SimulationEvent

Package	Description
broadwick.stochastic	Provides classes for solving models stochastically.
broadwick.stochastic.algorithms	Provides algorithms to implement the stochastic processes.

Uses of SimulationEvent in broadwick.stochastic

Fields in broadwick.stochastic with type parameters of type SimulationEvent

Modifier and Type	Field and Description
private Map<SimulationEvent,Double>	TransitionKernel.kernel

Methods in broadwick.stochastic that return types with arguments of type SimulationEvent

Modifier and Type	Method and Description
Map<SimulationEvent,Double>	TransitionKernel.getCDF() Get the cumulativeDistFn for this transition kernel.
Set<SimulationEvent>	TransitionKernel.getTransitionEvents() Get the collection of events stored in the transition kernel.

Methods in broadwick.stochastic with parameters of type SimulationEvent

Modifier and Type	Method and Description
void	TransitionKernel.addToKernel(SimulationEvent event, Double rate) Add the transition rate for a given event.
protected void	StochasticSimulator.doEvent(SimulationEvent mu, double t) Fires a reaction.
protected void	StochasticSimulator.doEvent(SimulationEvent event, double t, int n) Perform an event by informing the subscribed observers and the amountManager.
Double	TransitionKernel.getTransitionProbability(SimulationEvent event) Get the probability of an event occurring.
abstract void	Observer.observeEvent(SimulationEvent event, double tau, int times) Gets called before an event is triggered.
void	AmountManager.performEvent(SimulationEvent reaction, int times) Reflects a (multiple) firing of a reaction by adjusting the populations of the states.

Method parameters in broadwick.stochastic with type arguments of type SimulationEvent

Modifier and Type	Method and Description
void	TransitionKernel.setTransitionProbabilities(Map<SimulationEvent,Double> probabilities) Set the transition probabilities between states.

Uses of SimulationEvent in broadwick.stochastic.algorithms

Methods in broadwick.stochastic.algorithms that return SimulationEvent

Modifier and Type	Method and Description
private SimulationEvent	GillespieSimple.directMCReaction() obtains a random (but following a specific distribution) reaction as described by the direct method in chapter 5A page 417ff.