broadwick.phylo

Class PhyloNode

java.lang.Object

broadwick.graph.Vertex

broadwick.phylo.PhyloNode

All Implemented Interfaces:

Serializable

public class PhyloNode
extends Vertex

A node object for phylogenetic trees. Each node contains the id and the distance from the previous branching point.

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
private double	distance

Fields inherited from class broadwick.graph.Vertex

id, xCoord, yCoord

Constructor Summary

Constructors

Constructor and Description
PhyloNode(String name, double distance) Create an instance of the node.

Method Summary

Modifier and Type	Method and Description
boolean	equals(Object other)
int	hashCode()
String	toString()

Methods inherited from class broadwick.graph.Vertex

addAttribute, finalize, getAttributeByName, setXCoord, setYCoord

Methods inherited from class java.lang.Object

clone, getClass, notify, notifyAll, wait, wait, wait

Field Detail

distance

private double distance

Constructor Detail

PhyloNode

public PhyloNode(String name,
                 double distance)

Create an instance of the node.

Parameters:

name - the id for the node.

distance - the distance from the previous branching point.

Method Detail

toString

public final String toString()

Overrides:

toString in class Object

equals

public final boolean equals(Object other)

Overrides:

equals in class Object

hashCode

public final int hashCode()

Overrides:

hashCode in class Object